Detailed information of OS493_007604-T1 in Lophelia pertusa

Genomic Location: scaffold_17:137159...143374
NR annotation: KAJ7364971.1, hypothetical protein OS493_007604 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5F3B2E3 ubiquitin-protein ligase RNF166 OS=Gallus gallus OX=9031 GN=RNF166 PE=2 SV=1
Q3KPU8E3 ubiquitin-protein ligase RNF166 OS=Xenopus laevis OX=8355 GN=rnf166 PE=2 SV=1
Q3U9F6E3 ubiquitin-protein ligase RNF166 OS=Mus musculus OX=10090 GN=Rnf166 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|UBZ

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05605zf-Di19Drought induced 19 protein (Di19), zinc-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008598DomainDrought induced 19 protein type, zinc-binding domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR051438FamilyRNF E3 ubiquitin-protein ligaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46016ZINC FINGER, RING/FYVE/PHD-TYPEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

Expression pattern
 Expression trend for OS493_007604-T1 global co-expression network
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