Detailed information of OS493_007561-T1 in Lophelia pertusa

Genomic Location: scaffold_16:3866477...3881152
NR annotation: KAJ7374455.1, leucine-rich repeat serine threonine-protein kinase [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5S007Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2
Q5S006Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
Q55E58Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020859DomainRoc domainInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_007561-T1 global co-expression network
TOP