Detailed information of OS493_007518-T1 in Lophelia pertusa

Genomic Location: scaffold_16:3218641...3223616
NR annotation: KAJ7374413.1, hypothetical protein OS493_007518 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P62861Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein OS=Homo sapiens OX=9606 GN=FAU PE=1 SV=2
P62862Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein OS=Mus musculus OX=10090 GN=Fau PE=1 SV=2
G1T8A2Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein OS=Oryctolagus cuniculus OX=9986 GN=FAU PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF04758Ribosomal_S30Ribosomal protein S30FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR006846FamilySmall ribosomal subunit protein eS30Interproscan
IPR039415DomainUbiquitin-like protein FUBIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1265040S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02983RP-S30e, RPS30; small subunit ribosomal protein S30e-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_007518-T1 global co-expression network
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