Detailed information of OS493_007512-T1 in Lophelia pertusa

Genomic Location: scaffold_16:3169949...3175145
NR annotation: KAJ7374408.1, UBX domain-containing protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NXA9UBX domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubxn1 PE=2 SV=1
Q6GL77UBX domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubxn1 PE=2 SV=1
Q04323UBX domain-containing protein 1 OS=Homo sapiens OX=9606 GN=UBXN1 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00789UBXUBX domainDomainInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940DomainUbiquitin-associated domainInterproscan
IPR001012DomainUBX domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR041923DomainUBXN1, UBA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46340UBX DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0031397Biological Processnegative regulation of protein ubiquitinationInterproscan
GO:0032435Biological Processnegative regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0036435Molecular FunctionK48-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:1903094Biological Processnegative regulation of protein K48-linked deubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24348UBXN1_4; UBX domain-containing protein 1/4-Protein processing in endoplasmic reticulumko04141deepkoala

Expression pattern
 Expression trend for OS493_007512-T1 global co-expression network
TOP