Detailed information of OS493_007442-T1 in Lophelia pertusa

Genomic Location: scaffold_16:2441305...2448684
NR annotation: KAJ7374353.1, hypothetical protein OS493_007442 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4GZT3Polycystin-2 OS=Bos taurus OX=9913 GN=PKD2 PE=2 SV=1
H2LRU7Polycystin-2 OS=Oryzias latipes OX=8090 GN=pkd2 PE=1 SV=2
A2A259Polycystin-2-like protein 1 OS=Mus musculus OX=10090 GN=Pkd2l1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051223FamilyPolycystinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR046791DomainPolycystin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

Expression pattern
 Expression trend for OS493_007442-T1 global co-expression network
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