Detailed information of OS493_007232-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_007232-T1E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBERscaffold_1536224903640020-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD|RAWUL
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF16207RAWULRAWUL domain RING finger- and WD40-associated ubiquitin-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR032443DomainRAWUL domainInterproscan
IPR042741DomainRING1 , RING finger, HC subclassInterproscan
IPR043540FamilyE3 ubiquitin-protein ligase RING1/RING2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR46076E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0031519Cellular ComponentPcG protein complexInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_007232-T1 global RNA-seq network
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