Detailed information of OS493_006951-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_006951-T1TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATEDscaffold_1443202114327726+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00551Formyl_trans_NFormyl transferaseDomainInterproscan
PF00586AIRSAIR synthase related protein, N-terminal domainDomainInterproscan
PF02769AIRS_CAIR synthase related protein, C-terminal domainDomainInterproscan
PF02843GARS_CPhosphoribosylglycinamide synthetase, C domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001555Active_sitePhosphoribosylglycinamide formyltransferase, active siteInterproscan
IPR002376DomainFormyl transferase, N-terminalInterproscan
IPR004607FamilyPhosphoribosylglycinamide formyltransferaseInterproscan
IPR004733FamilyPhosphoribosylformylglycinamidine cyclo-ligaseInterproscan
IPR010918DomainPurM-like, C-terminal domainInterproscan
IPR011054Homologous_superfamilyRudiment single hybrid motifInterproscan
IPR016188DomainPurM-like, N-terminal domainInterproscan
IPR020560DomainPhosphoribosylglycinamide synthetase, C-domainInterproscan
IPR036477Homologous_superfamilyFormyl transferase, N-terminal domain superfamilyInterproscan
IPR036676Homologous_superfamilyPurM-like, C-terminal domain superfamilyInterproscan
IPR036921Homologous_superfamilyPurM-like, N-terminal domain superfamilyInterproscan
IPR037123Homologous_superfamilyPhosphoribosylglycinamide synthetase, C-domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10520TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004637Molecular Functionphosphoribosylamine-glycine ligase activityInterproscan
GO:0004641Molecular Functionphosphoribosylformylglycinamidine cyclo-ligase activityInterproscan
GO:0004644Molecular Functionphosphoribosylglycinamide formyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0006189Biological Process'de novo' IMP biosynthetic processInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0009113Biological Processpurine nucleobase biosynthetic processInterproscan
GO:0046084Biological Processadenine biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_006951-T1 global RNA-seq network
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