Detailed information of OS493_006895-T1 in Lophelia pertusa

Genomic Location: scaffold_14:3617928...3622324
NR annotation: KAJ7386862.1, Fibronectin type 3 and ankyrin repeat domains protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR044611FamilyUbiquitin-protein ligase E3A/B/C-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45700UBIQUITIN-PROTEIN LIGASE E3CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22371G2H3; G2/M phase-specific E3 ubiquitin-protein ligaseEC:2.3.2.26
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_006895-T1 global co-expression network
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