Detailed information of OS493_006798-T1 in Lophelia pertusa

Genomic Location: scaffold_14:2237550...2244973
NR annotation: KAJ7386773.1, Charged multivesicular body protein 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9VVI9Charged multivesicular body protein 5 OS=Drosophila melanogaster OX=7227 GN=Vps60 PE=1 SV=2
Q7T339Charged multivesicular body protein 5 OS=Danio rerio OX=7955 GN=chmp5 PE=2 SV=1
Q9LPN5Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03357Snf7Snf7FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005024FamilySnf7 familyInterproscan
IPR010989Homologous_superfamilySNAREInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22761CHARGED MULTIVESICULAR BODY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0006900Biological Processvesicle budding from membraneInterproscan
GO:0007034Biological Processvacuolar transportInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12198CHMP5, VPS60; charged multivesicular body protein 5-Membrane traffickingko04131deepkoala

Expression pattern
 Expression trend for OS493_006798-T1 global co-expression network
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