Detailed information of OS493_006726-T1 in Lophelia pertusa

Genomic Location: scaffold_14:1514801...1538468
NR annotation: KAJ7386714.1, hypothetical protein OS493_006726 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91755Glutamate receptor ionotropic, kainate 2 OS=Xenopus laevis OX=8355 GN=grik2 PE=2 SV=2
P23818Glutamate receptor 1 OS=Mus musculus OX=10090 GN=Gria1 PE=1 SV=1
A0A2R8QF68Glutamate receptor ionotropic, kainate 2 OS=Danio rerio OX=7955 GN=grik2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008066Molecular Functionglutamate receptor activityInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0035249Biological Processsynaptic transmission, glutamatergicInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0050804Biological Processmodulation of chemical synaptic transmissionInterproscan
GO:0098839Cellular Componentpostsynaptic density membraneInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan

Expression pattern
 Expression trend for OS493_006726-T1 global co-expression network
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