Detailed information of OS493_006587-T1 in Lophelia pertusa

Genomic Location: scaffold_13:4447702...4451544
NR annotation: KAJ7393601.1, Y-box-binding protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21573Y-box-binding protein 1 OS=Xenopus laevis OX=8355 GN=ybx1 PE=2 SV=1
P41824Y-box factor homolog OS=Aplysia californica OX=6500 PE=2 SV=1
Q9JKB3Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR011129DomainCold shock domainInterproscan
IPR050181FamilyCold shock domain-containing proteinInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11544COLD SHOCK DOMAIN CONTAINING PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09276YBX1, NSEP1; Y-box-binding protein 1-Spliceosomeko03041deepkoala

Expression pattern
 Expression trend for OS493_006587-T1 global co-expression network
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