Detailed information of OS493_006561-T1 in Lophelia pertusa

Genomic Location: scaffold_13:4268800...4273147
NR annotation: KAJ7393576.1, hypothetical protein OS493_006561 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9YHT2Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallus gallus OX=9031 GN=SDHB PE=1 SV=1
P21913Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhb PE=2 SV=2
Q9CQA3Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhb PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13085Fer2_32Fe-2S iron-sulfur cluster binding domainDomainInterproscan
PF13534Fer4_174Fe-4S dicluster domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004489FamilySuccinate dehydrogenase/fumarate reductase iron-sulphur proteinInterproscan
IPR001041Domain2Fe-2S ferredoxin-type iron-sulfur binding domainInterproscan
IPR017900Conserved_site4Fe-4S ferredoxin, iron-sulphur binding, conserved siteInterproscan
IPR050573FamilySuccinate Dehydrogenase/Fumarate Reductase Iron-SulfurInterproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR009051Homologous_superfamilyAlpha-helical ferredoxinInterproscan
IPR036010Homologous_superfamily2Fe-2S ferredoxin-like superfamilyInterproscan
IPR006058Binding_site2Fe-2S ferredoxin, iron-sulphur binding siteInterproscan
IPR025192DomainSuccinate dehydogenase/fumarate reductase N-terminalInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0009060Biological Processaerobic respirationInterproscan
GO:0022904Biological Processrespiratory electron transport chainInterproscan
GO:0031966Cellular Componentmitochondrial membraneInterproscan
GO:0051537Molecular Function2 iron, 2 sulfur cluster bindingInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00235SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunitEC:1.3.5.1
Non-alcoholic fatty liver diseaseko04932deepkoala

Expression pattern
 Expression trend for OS493_006561-T1 global co-expression network
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