Detailed information of OS493_006365-T1 in Lophelia pertusa

Genomic Location: scaffold_13:2578696...2580834
NR annotation: KAJ7393393.1, DDB1- and CUL4-associated factor 10 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NWH1DDB1- and CUL4-associated factor 10 OS=Danio rerio OX=7955 GN=dcaf10 PE=2 SV=2
Q8AVS9DDB1- and CUL4-associated factor 10 OS=Xenopus laevis OX=8355 GN=dcaf10 PE=2 SV=1
Q5FW06DDB1- and CUL4-associated factor 10 OS=Xenopus tropicalis OX=8364 GN=dcaf10 PE=2 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR039085FamilyDDB1- and CUL4-associated factor 10Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14588DDB1- AND CUL4-ASSOCIATED FACTOR 10Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11802DCAF10; DDB1- and CUL4-associated factor 10-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_006365-T1 global co-expression network
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