Detailed information of OS493_006304-T1 in Lophelia pertusa

Genomic Location: scaffold_13:1851017...1863755
NR annotation: KAJ7393334.1, Calmodulin-binding transcription activator 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y6Y1Calmodulin-binding transcription activator 1 OS=Homo sapiens OX=9606 GN=CAMTA1 PE=1 SV=4
A2A891Calmodulin-binding transcription activator 1 OS=Mus musculus OX=10090 GN=Camta1 PE=2 SV=1
O94983Calmodulin-binding transcription activator 2 OS=Homo sapiens OX=9606 GN=CAMTA2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01833TIGIPT/TIG domainDomainInterproscan
PF03859CG-1CG-1 domainDomainInterproscan
PF00612IQIQ calmodulin-binding motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005559DomainCG-1 DNA-binding domainInterproscan
IPR002909DomainIPT domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23335CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21596CAMTA; calmodulin-binding transcription activator-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_006304-T1 global co-expression network
TOP