Gene detail

Detailed information of OS493_006265-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_006265-T1	FOLLISTATIN-RELATED	scaffold_13	1543134	1556678	+

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_006265-T1

ATGGCGAGGATTTTTCTACAAATACTCGCAGCTTTGTGCCTTTTGAGGACACTCTGTTTAGCCGCTAACGGTGATTTGACAAGATTCTGTCCGTTACCAGCATTTACTGGAAAGGGATATGTAGCATTCACCGGAGAGATAACGAGACTGTTTCTCGAAAGAAATAACCACGTTACAGCTCAAGTTCACGTGCGGAATGTGTATCGAAGCGATCTACAGCTGAGTAGTGTTACTGTAATAAACGCTATCGAACGAGCGTCATCGTGCGACCATCAACACAAGCTAGAAGACGTGAGGCTTTGGGTTGCAAAACGACATTCAAGCGGCTTTCTGACGGCAGTCGCCTCTCTACCCGTCACGATGAACATGGTTGATGAAGTTCTCAAAGCGCTTCCAGATCATTCTTTCGACAATGGTGGCAAGTTACTAGCTTTCCAACAAGGAATAGAACCATGTAACGAAAGGAACTGTCAATACGGTGGTGAATGTACAGCAGATTCAAGCGGTCGTTTACGCTGTCAGTGTAGAATATACTGTACTCGGCAATATGACCCAGTCTGTGGAACAGACGGTGCCACGAGCTGTCAAGGCTTGAAAGATGCTGGCGTCGCTTCTACAGACGGCGAATACGTCATATATGTAAGATCAGAGTGTAACACGCCAATGAAGGTCTACTGTCATGGTATGAATACCAGTTCACCTAAAGAATTCGTCACACTGCCTGCTGGTGTTCAAAACAACTACGCCTATATCTACGCTAAACGGCTGCCTCACAGACCCTACTCGGCGAGATACAAATGTTCGGGAAAACCAGGAATGATAAACTACGGCGCAGCAGGATTGACGAAGTACCGAAAAGTTCGCGTAGACCTCCCGAGGATGGCCATTGTACGAGACGATTACACCTTCGCCAAGTCGGATCCGTTCGGTAAAAGAATCGCCTATGGTTCGGCTGGCGATTGTTTCTCAATGCGATTTCTCGGCGAGTCGTGCAGGAGGGGGCATTTCAAAGTTGATCTGACCCACACTGGGTTGCGCTTGAAGACATCCATAGAATGGCAAGCGATCGGTTTCCCCCCTGGAATTGAAATGAACGAATACAAAAGATCAAAGGATGGTACCTTGGTCTCCGCTAAGTGCGGGGGGTGGTGTGGAAGGTGTAGGCCTGTTGGGGAAATGCTGTTGGAGCAGACTGTCTGTAGTCAAGAAGAAGATCCCTGTCAGTTGATTGTTTGTGAATTCTACTCGATCTGCCGCCGGTCCAGTGATGGCCTCAGCCATGTGTGTGAATGCCCTTCAAACTGTTCACAGGCCAATTCTCCAGTCTGTGGAAGCGATGGAAAGACTTATGAGAATGAATGTGAGCTGCAAAGACACTCCTGCTCCAATAGAGAAAAGATCACAGCCAAAAGCATGACAGCATGTGGTGTAAAACAACCTGTTCACCTCATGTTTGCTGTCGACACCACAAGTATGAATGAAATGAAAGTTATAGAAAAATCAAAACGATTCTTCAAAGATCTGGGGAACAGATTCCAGATCCCAGAACAAGGAATAGCACATGGATTTTTGAAGTTTGATCTCAGTGGCACAGCCAAGATGTATTTCATTACGTTTTACAATTATATTGCTTTGCCTGCGTATATTAACACACTGCAAAGTACTAATGACAAGACAACACTGGATCAGGCCTTGACAGATTCTGTACCTGGTCTCTTGTACAGTCTGGAGTACGACAACAAGCTCAGAAACAGTCAGTACCCTAAGGCTATTGTACTTATCACCGATGGAAGTAGTGTGACCTACCCTCAAGGCCTTGTAGCCATTGCTAAATCATTAAAGGACGCAGGGATTAAAGTCATAGTTGTTCTTGTTGGGGATGAAGATAAAGGTTTAGACAATGTGAGACCATTAGCTTCAGGGAAGGATTTCATTTTGGCTGTCGGGTCACCTGATCGACTGAAGGTGATGGTACAACCAACAGTGGACAAAATAATGCAAGGTTTGGATACTTGTGTTTGGAAACGCTGTAATTTCTACTCAAAGTGTGTCAAACGTGATGTCACAAAGTGTGAGTGTAGCCTGGTGACCAGTGATGTTAACAATCCAGTTTGTGGCTCAGATGGCAAGTCTTATAACAACTTGGATGCGATGGAACAAGCAGCCTGCCAGGAACACAAATGGATTGTACCTCGACACAGAGGAAGATGCGTCACTGTTCCTGGCTGTAACCTTCTGGATTGCAAACATTACTCTTATTGCACGGTGCCACCTTCTGGAATTGCCACATGCAAGTGCCCTGACCCGGCTGCCTGTGGCAACTCCAGGAACCGTGTGTGTGGCACGGATGGATTGACATATGACAACATCTGCCAGCTAACAGCAGCTGCCTGCAAGCGGTACCATGAGGTCAGGGTGTTACATGCTGGACTCTGCATACAACAACCACTCGACCTCGTGTTTGCCTTGGACGGAGCAGGCCAGATAACCCTGGGCACTTTCCAGAAACAGAAAGACTTCATCAAGCAGTTCCTGGACACTTACGGTACTTCAGCGCCTGGAGTGCGCGTGGGTATCATCGACTATGGCTCGGGTGAAACTCTAGCAGAATTCCAGAACTATGACACAGACAATCTCAAGGACAAGGTTGACAGAGTTAGTTTAACACCTGGAGGCACAGTAGAAGGTGCTTTACGCAATGCTCAGAGCAAGCTGTTTGGAGATCCTAAGCTGCTTAGACCTCACGCAACAAAAGCATTGATCGTTCTGACAGGGGAGCGTGTTGATGAAGGTGATAGAGGATTGCGCGACGCGGCATCACCTTTAACAAGCAAGGGAGTCAGAATCGTGGCGATAGCTGTGGGCAAGACACCGGATAAACGGAAACTGTTGATTTTCACTTCCGGTGACGAATACGTGTTTGATTTTGACAGCAATGAAGATCTGCCGTCTTTAGTGCCAAAAGTTTACGAAGTGATAATAAAAGATCCATGCGAGAAGAAGGAATGTAAGCACTATGCTCAGTGTGTTTCGTATGACAATGGAAGGACACAGTGTGTTTGTGATGAACAGTGTGCCAAAGTTGAAGATCCCGTATGCGGAACAGATGGACAGGATTATGCTAACGAGTGTGTACTCAAGGCTACAGCTTGCCGAGAGAGCAGAGATGTTACAGTAGCTGATACAAGGCCTTGTGGAGCCTGTGTTCACGCCATGGATATTGGTATAATTGTGGATTCATCTCGAAGTGTTGGATGGAATAACTACGAGACCCTAAAGCGCTCACTAGCCAAGCTGACAGATTACTTTCATGTGTCTAAAGACGGAACACACTTTGCCTTCATTCACTACAATCAAGACGCTGTCTTAGACTTTGACTTCGCTGACTCGTCTTTACACAACCCTGAAGCTCTAAAAGAAAAGATCATGGAAATAAAATATGACCCAGGCCGCACTCGGACGGACAAAGCTATTAAAATGGCCAACGAGAAACTGTTTACCAACATGGGTGGAGCCAGGAAGGATGTGCCAAAGTTCCTGATTATACTTACAGATGGTAAAACTAGCGAGGATTCCATGCCTTACCCAACAGTTCTGGCGCCTCTGAAGGTAAAGTCCTGA

Transcript

OS493_006265-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00050	Kazal_1	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF08685	GON	GON domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR002350	Domain	Kazal domain	Interproscan
IPR012314	Domain	Peptidase M12B, GON-ADAMTSs	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR050653	Family	Protease Inhibitors and Growth Factor Antagonists	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10913	FOLLISTATIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_006265-T1 global RNA-seq network