Gene detail

Detailed information of OS493_006264-T1 in Lophelia pertusa

Genomic Location: scaffold_13:1533134...1537784
NR annotation: KAJ7393295.1, Pre-mRNA-splicing factor SPF27 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6PBE2	Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1
Q5RKQ0	Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1
O75934	Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05700	BCAS2	Breast carcinoma amplified sequence 2 (BCAS2)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008409	Family	Pre-mRNA-splicing factor SPF27	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13296	BCAS2 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0000974	Cellular Component	Prp19 complex	Interproscan
GO:0071011	Cellular Component	precatalytic spliceosome	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12861	BCAS2; pre-mRNA-splicing factor SPF27	-	DNA repair and recombination proteins	ko03400	deepkoala

Expression pattern