Detailed information of OS493_006172-T1 in Lophelia pertusa

Genomic Location: scaffold_13:707535...714268
NR annotation: KAJ7393204.1, hypothetical protein OS493_006172 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08685GONGON domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF07691PA14PA14 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR011658DomainPA14 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

Expression pattern
 Expression trend for OS493_006172-T1 global co-expression network
TOP