Detailed information of OS493_006019-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_006019-T1TRANSCRIPTION TERMINATION FACTOR 2-RELATEDscaffold_1237365673738708+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR050628FamilySNF2/RAD54 Helicase and Transcription FactorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_006019-T1 global RNA-seq network
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