Detailed information of OS493_006012-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_006012-T1SERUM RESPONSE FACTOR HOMOLOGscaffold_1236711123682966-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilySRF

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00319SRF-TFSRF-type transcription factor (DNA-binding and dimerisation domain)DomainInterproscan
PF12347HJURP_CHolliday junction regulator protein family C-terminal repeatDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002100DomainTranscription factor, MADS-boxInterproscan
IPR022102DomainHolliday junction regulator protein family C-terminalInterproscan
IPR033896DomainMADS MEF2-likeInterproscan
IPR036879Homologous_superfamilyTranscription factor, MADS-box superfamilyInterproscan
IPR050142FamilyMADS-box/MEF2 Transcription FactorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48019SERUM RESPONSE FACTOR HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_006012-T1 global RNA-seq network
TOP