Gene detail

Detailed information of OS493_006012-T1 in Lophelia pertusa

Genomic Location: scaffold_12:3671112...3682966
NR annotation: KAJ7339608.1, Myocyte-specific enhancer factor 2C [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A4UTP7	Myocyte-specific enhancer factor 2C OS=Sus scrofa OX=9823 GN=MEF2C PE=2 SV=1
Q2MJT0	Myocyte-specific enhancer factor 2A OS=Rattus norvegicus OX=10116 GN=Mef2a PE=1 SV=1
Q02078	Myocyte-specific enhancer factor 2A OS=Homo sapiens OX=9606 GN=MEF2A PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00319	SRF-TF	SRF-type transcription factor (DNA-binding and dimerisation domain)	Domain	Interproscan
PF12347	HJURP_C	Holliday junction regulator protein family C-terminal repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036879	Homologous_superfamily	Transcription factor, MADS-box superfamily	Interproscan
IPR002100	Domain	Transcription factor, MADS-box	Interproscan
IPR033896	Domain	MADS MEF2-like	Interproscan
IPR022102	Domain	Holliday junction regulator protein family C-terminal	Interproscan
IPR050142	Family	MADS-box/MEF2 Transcription Factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Expression pattern