Detailed information of OS493_006003-T1 in Lophelia pertusa

Genomic Location: scaffold_12:3569492...3571382
NR annotation: KAJ7339599.1, hypothetical protein OS493_006003 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8MJI9Homeobox protein prophet of Pit-1 OS=Bos taurus OX=9913 GN=PROP1 PE=2 SV=1
O75360Homeobox protein prophet of Pit-1 OS=Homo sapiens OX=9606 GN=PROP1 PE=1 SV=2
Q3LU41Homeobox protein prophet of Pit-1 OS=Theropithecus gelada OX=9565 GN=PROP1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR043378FamilyPaired mesoderm homeobox protein 1/2Interproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46385PAIRED MESODERM HOMEOBOX PROTEIN 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

Expression pattern
 Expression trend for OS493_006003-T1 global co-expression network
TOP