Detailed information of OS493_005962-T1 in Lophelia pertusa

Genomic Location: scaffold_12:2858086...2866994
NR annotation: KAJ7339561.1, hypothetical protein OS493_005962 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9CPU9Protein SLC31A2 OS=Mus musculus OX=10090 GN=Slc31a2 PE=1 SV=1
O15432Protein SLC31A2 OS=Homo sapiens OX=9606 GN=SLC31A2 PE=1 SV=1
Q8WNR0High affinity copper uptake protein 1 OS=Sus scrofa OX=9823 GN=SLC31A1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04145CtrCtr copper transporter familyFamilyInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050663FamilyAnkyrin Repeat and SOCS BoxInterproscan
IPR007274FamilyCtr copper transporterInterproscan
IPR002110RepeatAnkyrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24193ANKYRIN REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005375Molecular Functioncopper ion transmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035434Biological Processcopper ion transmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_005962-T1 global co-expression network
TOP