Detailed information of OS493_005598-T1 in Lophelia pertusa

Genomic Location: scaffold_11:3021363...3034043
NR annotation: KAJ7365490.1, DDB1- and CUL4-associated factor 4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q58DC2DDB1- and CUL4-associated factor 4 OS=Bos taurus OX=9913 GN=DCAF4 PE=2 SV=1
Q8WV16DDB1- and CUL4-associated factor 4 OS=Homo sapiens OX=9606 GN=DCAF4 PE=1 SV=3
Q8NA75DDB1- and CUL4-associated factor 4-like protein 2 OS=Homo sapiens OX=9606 GN=DCAF4L2 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR052254FamilyCUL4-DDB1 E3 ligase complex substrate receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44472DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11799DCAF4; DDB1- and CUL4-associated factor 4-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_005598-T1 global co-expression network
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