Detailed information of OS493_005516-T1 in Lophelia pertusa

Genomic Location: scaffold_11:2078665...2079629
NR annotation: KAJ7365409.1, hypothetical protein OS493_005516 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q00059Transcription factor A, mitochondrial OS=Homo sapiens OX=9606 GN=TFAM PE=1 SV=1
Q91ZW1Transcription factor A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tfam PE=2 SV=1
Q5D144Transcription factor A, mitochondrial OS=Sus scrofa OX=9823 GN=TFAM PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008301Molecular FunctionDNA binding, bendingInterproscan

Expression pattern
 Expression trend for OS493_005516-T1 global co-expression network
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