Detailed information of OS493_005494-T1 in Lophelia pertusa

Genomic Location: scaffold_11:1915891...1919314
NR annotation: KAJ7365387.1, Zinc finger CCHC domain-containing protein 8 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9CYA6Zinc finger CCHC domain-containing protein 8 OS=Mus musculus OX=10090 GN=Zcchc8 PE=1 SV=3
Q6NZY4Zinc finger CCHC domain-containing protein 8 OS=Homo sapiens OX=9606 GN=ZCCHC8 PE=1 SV=2
Q5R789Zinc finger CCHC domain-containing protein 8 OS=Pongo abelii OX=9601 GN=ZCCHC8 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04046PSPPSPFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR052115FamilyNuclear exosome targeting complex subunit ZCCHC8Interproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR006568DomainPSP, proline-richInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13316ZINC FINGER, CCHC DOMAIN CONTAINING 8Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0034470Biological Processobsolete ncRNA processingInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13128ZCCHC8; zinc finger CCHC domain-containing protein 8-Spliceosomeko03041deepkoala

Expression pattern
 Expression trend for OS493_005494-T1 global co-expression network
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