Detailed information of OS493_005386-T1 in Lophelia pertusa

Genomic Location: scaffold_11:903746...907485
NR annotation: KAJ7365284.1, hypothetical protein OS493_005386 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O88420Sodium channel protein type 8 subunit alpha OS=Rattus norvegicus OX=10116 GN=Scn8a PE=1 SV=1
Q99250Sodium channel protein type 2 subunit alpha OS=Homo sapiens OX=9606 GN=SCN2A PE=1 SV=3
B1AWN6Sodium channel protein type 2 subunit alpha OS=Mus musculus OX=10090 GN=Scn2a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005821DomainIon transport domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR043203FamilyVoltage-gated cation channel calcium and sodiumInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0001518Cellular Componentvoltage-gated sodium channel complexInterproscan
GO:0005248Molecular Functionvoltage-gated sodium channel activityInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0019228Biological Processneuronal action potentialInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0086010Biological Processmembrane depolarization during action potentialInterproscan

Expression pattern
 Expression trend for OS493_005386-T1 global co-expression network
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