Detailed information of OS493_005382-T1 in Lophelia pertusa

Genomic Location: scaffold_11:869037...871080
NR annotation: KAJ7365281.1, hypothetical protein OS493_005382 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q20JQ7Sodium channel protein type 4 subunit alpha B OS=Danio rerio OX=7955 GN=scn4ab PE=2 SV=1
Q15858Sodium channel protein type 9 subunit alpha OS=Homo sapiens OX=9606 GN=SCN9A PE=1 SV=3
O08562Sodium channel protein type 9 subunit alpha OS=Rattus norvegicus OX=10116 GN=Scn9a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR043203FamilyVoltage-gated cation channel calcium and sodiumInterproscan
IPR005821DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001518Cellular Componentvoltage-gated sodium channel complexInterproscan
GO:0005248Molecular Functionvoltage-gated sodium channel activityInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0019228Biological Processneuronal action potentialInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0086010Biological Processmembrane depolarization during action potentialInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00995pgsA, PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferaseEC:2.7.8.5
Glycerophospholipid metabolismko00564deepkoala

Expression pattern
 Expression trend for OS493_005382-T1 global co-expression network
TOP