Detailed information of OS493_005315-T1 in Lophelia pertusa

Genomic Location: scaffold_10:5129796...5131496
NR annotation: KAJ7374955.1, hypothetical protein OS493_005315 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R049E3 ubiquitin-protein ligase AMFR OS=Mus musculus OX=10090 GN=Amfr PE=1 SV=2
Q9UKV5E3 ubiquitin-protein ligase AMFR OS=Homo sapiens OX=9606 GN=AMFR PE=1 SV=2
F1QB30E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=amfra PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|CUE

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02845CUECUE domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003892DomainUbiquitin system component CUEInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15067E3 UBIQUITIN-PROTEIN LIGASE RNF8Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070936Biological Processprotein K48-linked ubiquitinationInterproscan

Expression pattern
 Expression trend for OS493_005315-T1 global co-expression network
TOP