Detailed information of OS493_005178-T1 in Lophelia pertusa

Genomic Location: scaffold_10:3631116...3691308
NR annotation: KAJ7374826.1, hypothetical protein OS493_005178 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00014Kunitz_BPTIKunitz/Bovine pancreatic trypsin inhibitor domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR044004DomainSpondin-like TSP1 domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR036880Homologous_superfamilyPancreatic trypsin inhibitor Kunitz domain superfamilyInterproscan
IPR002223DomainPancreatic trypsin inhibitor Kunitz domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004867Molecular Functionserine-type endopeptidase inhibitor activityInterproscan

Expression pattern
 Expression trend for OS493_005178-T1 global co-expression network
TOP