Detailed information of OS493_005178-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_005178-T1PROPERDINscaffold_1036311163691308-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00014Kunitz_BPTIKunitz/Bovine pancreatic trypsin inhibitor domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR002223DomainPancreatic trypsin inhibitor Kunitz domainInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR036880Homologous_superfamilyPancreatic trypsin inhibitor Kunitz domain superfamilyInterproscan
IPR044004DomainSpondin-like TSP1 domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004867Molecular Functionserine-type endopeptidase inhibitor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_005178-T1 global RNA-seq network
TOP