Detailed information of OS493_005023-T1 in Lophelia pertusa

Genomic Location: scaffold_10:2004071...2016026
NR annotation: KAJ7374681.1, hypothetical protein OS493_005023 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IXH7Negative elongation factor C/D OS=Homo sapiens OX=9606 GN=NELFCD PE=1 SV=2
Q5RFA0Negative elongation factor D OS=Pongo abelii OX=9601 GN=NELFCD PE=2 SV=1
A5GFY4Negative elongation factor D OS=Sus scrofa OX=9823 GN=NELFCD PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04858TH1TH1 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006942FamilyTH1 proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12144NEGATIVE ELONGATION FACTOR DInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0032021Cellular ComponentNELF complexInterproscan
GO:0034244Biological Processnegative regulation of transcription elongation by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15181TH1L, NELFD; negative elongation factor C/D-Transcription machineryko03021deepkoala

Expression pattern
 Expression trend for OS493_005023-T1 global co-expression network
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