Detailed information of OS493_004880-T1 in Lophelia pertusa

Genomic Location: scaffold_10:631094...640713
NR annotation: KAJ7374542.1, Jumonji and AT-rich interaction domain containing 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5F363Protein Jumonji OS=Gallus gallus OX=9031 GN=JARID2 PE=2 SV=1
Q92833Protein Jumonji OS=Homo sapiens OX=9606 GN=JARID2 PE=1 SV=2
Q62315Protein Jumonji OS=Mus musculus OX=10090 GN=Jarid2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF02375JmjNjmjN domainFamilyInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001606DomainARID DNA-binding domainInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR003347DomainJmjC domainInterproscan
IPR003349DomainJmjN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10694LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

Expression pattern
 Expression trend for OS493_004880-T1 global co-expression network
TOP