Detailed information of OS493_004871-T1 in Lophelia pertusa

Genomic Location: scaffold_10:461024...463504
NR annotation: KAJ7374533.1, Gamma-aminobutyric acid receptor-associated protein-like 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P60519Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Bos taurus OX=9913 GN=GABARAPL2 PE=1 SV=1
P60520Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Homo sapiens OX=9606 GN=GABARAPL2 PE=1 SV=1
P60521Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Mus musculus OX=10090 GN=Gabarapl2 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|ATG8

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02991ATG8Autophagy protein Atg8 ubiquitin likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004241FamilyAutophagy protein Atg8 ubiquitin-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000421Cellular Componentautophagosome membraneInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006995Biological Processcellular response to nitrogen starvationInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08341GABARAP, ATG8, LC3; GABA(A) receptor-associated protein-Mitochondrial biogenesisko03029deepkoala

Expression pattern
 Expression trend for OS493_004871-T1 global co-expression network
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