Detailed information of OS493_004868-T1 in Lophelia pertusa

Genomic Location: scaffold_10:423926...426723
NR annotation: KAJ7374530.1, PQ-loop repeat-containing protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NRS2Solute carrier family 66 member 2 OS=Xenopus laevis OX=8355 GN=slc66a2 PE=2 SV=1
Q0VCC1Solute carrier family 66 member 2 OS=Bos taurus OX=9913 GN=SLC66A2 PE=2 SV=1
Q8N2U9Solute carrier family 66 member 2 OS=Homo sapiens OX=9606 GN=SLC66A2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04193PQ-loopPQ loop repeat RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006603RepeatPQ-loop repeatInterproscan
IPR052241FamilySolute Carrier Family 66 (SLC66) and Scramblase ANY1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14856PQ-LOOP REPEAT-CONTAINING PROTEIN 1-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0045332Biological Processphospholipid translocationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23679PQLC1, SLC66A2; solute carrier family 66, member 2-Transportersko02000deepkoala

Expression pattern
 Expression trend for OS493_004868-T1 global co-expression network
TOP