Detailed information of OS493_004740-T1 in Lophelia pertusa

Genomic Location: scaffold_9:4134283...4138251
NR annotation: KAJ7381142.1, Nuclear factor NF-kappa-B p105 subunit [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6F3J0Nuclear factor NF-kappa-B p105 subunit OS=Canis lupus familiaris OX=9615 GN=NFKB1 PE=2 SV=2
Q63369Nuclear factor NF-kappa-B p105 subunit OS=Rattus norvegicus OX=10116 GN=Nfkb1 PE=1 SV=2
Q04861Nuclear factor NF-kappa-B p105 subunit OS=Gallus gallus OX=9031 GN=NFKB1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00554RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037059Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan
IPR030492Conserved_siteRel homology domain, conserved siteInterproscan
IPR000451FamilyNF-kappa-B/DorsalInterproscan
IPR011539DomainRel homology domain, DNA-binding domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24169NUCLEAR FACTOR NF-KAPPA-B PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

Expression pattern
 Expression trend for OS493_004740-T1 global co-expression network
TOP