Detailed information of OS493_004739-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_004739-T1NUCLEAR FACTOR NF-KAPPA-B PROTEINscaffold_941284554134161-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF16179RHD_dimerRel homology dimerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000451FamilyNF-kappa-B/DorsalInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR002909DomainIPT domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR032397DomainRel homology dimerisation domainInterproscan
IPR033926DomainNFkappaB IPT domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24169NUCLEAR FACTOR NF-KAPPA-B PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_004739-T1 global RNA-seq network
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