Detailed information of OS493_004572-T1 in Lophelia pertusa

Genomic Location: scaffold_9:1888146...1897835
NR annotation: KAJ7380979.1, hypothetical protein OS493_004572 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q63661Mucin-4 OS=Rattus norvegicus OX=10116 GN=Muc4 PE=1 SV=2
Q99102Mucin-4 OS=Homo sapiens OX=9606 GN=MUC4 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06702CD93; CDW93 antigen-Lectinsko04091deepkoala

Expression pattern
 Expression trend for OS493_004572-T1 global co-expression network
TOP