Detailed information of OS493_004493-T1 in Lophelia pertusa

Genomic Location: scaffold_9:671867...678674
NR annotation: KAJ7380909.1, PAX-interacting protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JNA8PAX-interacting protein 1 OS=Bos taurus OX=9913 GN=PAXIP1 PE=2 SV=1
Q6NZQ4PAX-interacting protein 1 OS=Mus musculus OX=10090 GN=Paxip1 PE=1 SV=1
Q6ZW49PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12738PTCB-BRCTtwin BRCT domainFamilyInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357DomainBRCT domainInterproscan
IPR053036FamilyCell Cycle and DNA Repair RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47667REGULATOR OF TY1 TRANSPOSITION PROTEIN 107Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0035361Cellular ComponentCul8-RING ubiquitin ligase complexInterproscan
GO:1990683Biological ProcessDNA double-strand break attachment to nuclear envelopeInterproscan

Expression pattern
 Expression trend for OS493_004493-T1 global co-expression network
TOP