Detailed information of OS493_004462-T1 in Lophelia pertusa

Genomic Location: scaffold_9:292038...299090
NR annotation: KAJ7380879.1, hypothetical protein OS493_004462 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1MT80Guanylate-binding protein 4 OS=Danio rerio OX=7955 GN=gbp4 PE=1 SV=1
Q0ZHH6Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2
Q91YH5Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02809UIMUbiquitin interaction motifMotifInterproscan
PF02263GBPGuanylate-binding protein, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030386DomainGB1/RHD3-type guanine nucleotide-binding (G) domainInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR015894DomainGuanylate-binding protein, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10751GUANYLATE BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan

Expression pattern
 Expression trend for OS493_004462-T1 global co-expression network
TOP