Detailed information of OS493_004389-T1 in Lophelia pertusa

Genomic Location: scaffold_8:5987502...5993081
NR annotation: KAJ7387395.1, Ubiquitin-2 like Rad60 SUMO-like [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0P4K8NFATC2-interacting protein OS=Xenopus tropicalis OX=8364 GN=nfatc2ip PE=2 SV=1
Q5EAX4Small ubiquitin-related modifier 1-B OS=Xenopus laevis OX=8355 GN=sumo1-b PE=3 SV=1
Q6DEP7Small ubiquitin-related modifier 1 OS=Xenopus tropicalis OX=8364 GN=sumo1 PE=3 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|SUMO

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11976Rad60-SLDUbiquitin-2 like Rad60 SUMO-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR052324FamilyNFATC2-Interacting & DNA RepairInterproscan
IPR022617DomainRad60/SUMO-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47187NFATC2-INTERACTING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001816Biological Processcytokine productionInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_004389-T1 global co-expression network
TOP