Detailed information of OS493_004367-T1 in Lophelia pertusa

Genomic Location: scaffold_8:5661035...5673552
NR annotation: KAJ7387373.1, mesenchymal cell apoptotic process [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q32NI9T-box transcription factor TBX1-B OS=Xenopus laevis OX=8355 GN=tbx1-b PE=2 SV=1
Q3SA49T-box transcription factor TBX1 OS=Xenopus tropicalis OX=8364 GN=tbx1 PE=2 SV=1
Q8AX98T-box transcription factor TBX1-A OS=Xenopus laevis OX=8355 GN=tbx1-a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00907T-boxT-boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR001699FamilyT-box transcription factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11267T-BOX PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10175TBX1; T-box protein 1-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_004367-T1 global co-expression network
TOP