Detailed information of OS493_004336-T1 in Lophelia pertusa

Genomic Location: scaffold_8:5246645...5255128
NR annotation: KAJ7387345.1, hypothetical protein OS493_004336 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR044066DomainTRIAD supradomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

Expression pattern
 Expression trend for OS493_004336-T1 global co-expression network
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