Gene detail

Detailed information of OS493_004222-T1 in Lophelia pertusa

Genomic Location: scaffold_8:3917214...3930014
NR annotation: KAJ7387246.1, T-box transcription factor tbx5 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9IAK8	T-box transcription factor TBX5-A OS=Danio rerio OX=7955 GN=tbx5a PE=2 SV=2
Q99593	T-box transcription factor TBX5 OS=Homo sapiens OX=9606 GN=TBX5 PE=1 SV=2
Q9PWE8	T-box transcription factor TBX5 OS=Gallus gallus OX=9031 GN=TBX5 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00907	T-box	T-box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036960	Homologous_superfamily	T-box superfamily	Interproscan
IPR001699	Family	T-box transcription factor	Interproscan
IPR046360	Domain	T-box transcription factor, DNA-binding domain	Interproscan
IPR018186	Conserved_site	Transcription factor, T-box, conserved site	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11267	T-BOX PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001708	Biological Process	cell fate specification	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10175	TBX1; T-box protein 1	-	Transcription factors	ko03000	deepkoala

Expression pattern