Detailed information of OS493_004219-T1 in Lophelia pertusa

Genomic Location: scaffold_8:3889431...3897782
NR annotation: KAJ7387245.1, hypothetical protein OS493_004219 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O73718T-box transcription factor TBX3 (Fragment) OS=Gallus gallus OX=9031 GN=TBX3 PE=2 SV=1
Q3SA48T-box transcription factor TBX2 OS=Xenopus tropicalis OX=8364 GN=tbx2 PE=2 SV=1
Q9IBC8T-box transcription factor TBX2-A OS=Xenopus laevis OX=8355 GN=tbx2-a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00907T-boxT-boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002070FamilyTranscription factor, BrachyuryInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR001699FamilyT-box transcription factorInterproscan
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11267T-BOX PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

Expression pattern
 Expression trend for OS493_004219-T1 global co-expression network
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