Detailed information of OS493_004147-T1 in Lophelia pertusa

Genomic Location: scaffold_8:2773284...2783321
NR annotation: KAJ7387180.1, hypothetical protein OS493_004147 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9AST1Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702 GN=TAF15 PE=1 SV=1
Q27294RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2
Q28009RNA-binding protein FUS OS=Bos taurus OX=9913 GN=FUS PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR034870FamilyTAF15/EWS/TLS familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23238RNA BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

Expression pattern
 Expression trend for OS493_004147-T1 global co-expression network
TOP