Detailed information of OS493_004118-T1 in Lophelia pertusa

Genomic Location: scaffold_8:2526690...2533255
NR annotation: KAJ7387152.1, putative E3 ubiquitin-protein ligase dtx2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8R3P2Probable E3 ubiquitin-protein ligase DTX2 OS=Mus musculus OX=10090 GN=Dtx2 PE=1 SV=2
Q9Y2E6E3 ubiquitin-protein ligase DTX4 OS=Homo sapiens OX=9606 GN=DTX4 PE=1 SV=2
Q86UW9Probable E3 ubiquitin-protein ligase DTX2 OS=Homo sapiens OX=9606 GN=DTX2 PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02825WWEWWE domainFamilyInterproscan
PF18102DTCDeltex C-terminal domainDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039399Homologous_superfamilyDeltex, C-terminal domain superfamilyInterproscan
IPR004170DomainWWE domainInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR039396DomainDeltex, C-terminalInterproscan
IPR039398FamilyDeltex familyInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12622DELTEX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

Expression pattern
 Expression trend for OS493_004118-T1 global co-expression network
TOP