Detailed information of OS493_003853-T1 in Lophelia pertusa

Genomic Location: scaffold_7:6499542...6505840
NR annotation: KAJ7394173.1, anaphase-promoting complex subunit 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P25054Adenomatous polyposis coli protein OS=Homo sapiens OX=9606 GN=APC PE=1 SV=2
Q61315Adenomatous polyposis coli protein OS=Mus musculus OX=10090 GN=Apc PE=1 SV=1
P70478Adenomatous polyposis coli protein OS=Rattus norvegicus OX=10116 GN=Apc PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00514ArmArmadillo/beta-catenin-like repeatRepeatInterproscan
PF18797APC_repAdenomatous polyposis coli (APC) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000225RepeatArmadilloInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR026818FamilyAdenomatous polyposis coli (APC) familyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR041257RepeatAdenomatous polyposis coli (APC) repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12607ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0005881Cellular Componentcytoplasmic microtubuleInterproscan
GO:0007026Biological Processnegative regulation of microtubule depolymerizationInterproscan
GO:0007389Biological Processpattern specification processInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030178Biological Processnegative regulation of Wnt signaling pathwayInterproscan
GO:0030877Cellular Componentbeta-catenin destruction complexInterproscan
GO:0045295Molecular Functiongamma-catenin bindingInterproscan
GO:0045595Biological Processregulation of cell differentiationInterproscan
GO:0045732Biological Processpositive regulation of protein catabolic processInterproscan
GO:0090090Biological Processnegative regulation of canonical Wnt signaling pathwayInterproscan

Expression pattern
 Expression trend for OS493_003853-T1 global co-expression network
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