| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_003672-T1 | HIGH MOBILITY GROUP PROTEIN 2 | scaffold_7 | 4543054 | 4551519 | - |
| CDS | |||||
| OS493_003672-T1 | |||||
| Transcript |
| OS493_003672-T1 |
| Protein |
| OS493_003672-T1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | HMG |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00505 | HMG_box | HMG (high mobility group) box | Domain | Interproscan |
| PF12171 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003604 | Domain | Matrin/U1-C-like, C2H2-type zinc finger | Interproscan |
| IPR009071 | Domain | High mobility group box domain | Interproscan |
| IPR022755 | Domain | Zinc finger, double-stranded RNA binding | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR036910 | Homologous_superfamily | High mobility group box domain superfamily | Interproscan |
| IPR051965 | Family | Chromatin Regulation and Neuronal Gene Expression | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46040 | HIGH MOBILITY GROUP PROTEIN 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_003672-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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