Detailed information of OS493_003668-T1 in Lophelia pertusa

Genomic Location: scaffold_7:4477794...4504035
NR annotation: KAJ7393997.1, bHLH transcription factor binding [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99081Transcription factor 12 OS=Homo sapiens OX=9606 GN=TCF12 PE=1 SV=1
Q61286Transcription factor 12 OS=Mus musculus OX=10090 GN=Tcf12 PE=1 SV=2
P51514Transcription factor 12 OS=Rattus norvegicus OX=10116 GN=Tcf12 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR051098FamilyNeuronal Differentiation E-box Binding Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11793BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_003668-T1 global co-expression network
TOP