Detailed information of OS493_003600-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_003600-T1CALICYLIN BINDING PROTEINscaffold_735437313550280+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01217Clat_adaptor_sClathrin adaptor complex small chainDomainInterproscan
PF04969CSCS domainDomainInterproscan
PF05002SGSSGS domain DomainInterproscan
PF09032Siah-Interact_NSiah interacting protein, N terminal DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000804Conserved_siteClathrin adaptor complex, small chainInterproscan
IPR007052DomainCS domainInterproscan
IPR007699DomainSGS domainInterproscan
IPR008978Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR015120DomainSiah interacting protein, N-terminalInterproscan
IPR022775DomainAP complex, mu/sigma subunitInterproscan
IPR027155FamilyAP-3 complex subunit sigmaInterproscan
IPR037201Homologous_superfamilyCalcyclin-binding protein, N-terminalInterproscan
IPR037893DomainCalcyclin-binding Protein, CS domainInterproscan
IPR052289FamilyCalcyclin-binding ubiquitin ligase bridgeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13164CALICYLIN BINDING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan
GO:0030123Cellular ComponentAP-3 adaptor complexInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0044548Molecular FunctionS100 protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_003600-T1 global RNA-seq network
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