Detailed information of OS493_003443-T1 in Lophelia pertusa

Genomic Location: scaffold_7:1499537...1518499
NR annotation: KAJ7393784.1, chromatin-modulating protein mrc1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90953Versican core protein OS=Gallus gallus OX=9031 GN=VCAN PE=2 SV=1
Q9ERB4Versican core protein (Fragments) OS=Rattus norvegicus OX=10116 GN=Vcan PE=2 SV=2
Q62059Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001304DomainC-type lectin-likeInterproscan
IPR045860Homologous_superfamilySnake toxin-like superfamilyInterproscan
IPR050111FamilyC-type lectin and snaclec domain-containing proteinInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22803MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0038023Molecular Functionsignaling receptor activityInterproscan

Expression pattern
 Expression trend for OS493_003443-T1 global co-expression network
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