Detailed information of OS493_003407-T1 in Lophelia pertusa

Genomic Location: scaffold_7:1041267...1049956
NR annotation: KAJ7393748.1, Mothers against decapentaplegic 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P84022Mothers against decapentaplegic homolog 3 OS=Homo sapiens OX=9606 GN=SMAD3 PE=1 SV=1
Q8BUN5Mothers against decapentaplegic homolog 3 OS=Mus musculus OX=10090 GN=Smad3 PE=1 SV=2
P84024Mothers against decapentaplegic homolog 3 OS=Sus scrofa OX=9823 GN=SMAD3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03166MH2MH2 domainFamilyInterproscan
PF03165MH1MH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR001132DomainSMAD domain, Dwarfin-typeInterproscan
IPR013790FamilyDwarfinInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13703SMADInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0032924Biological Processactivin receptor signaling pathwayInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23605SMAD3; mothers against decapentaplegic homolog 3-AGE-RAGE signaling pathway in diabetic complicationsko04933deepkoala

Expression pattern
 Expression trend for OS493_003407-T1 global co-expression network
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